CDS

Accession Number TCMCG075C02401
gbkey CDS
Protein Id XP_017980140.1
Location complement(join(16325606..16325827,16325916..16326031,16326992..16327061,16327167..16327397))
Gene LOC18612740
GeneID 18612740
Organism Theobroma cacao

Protein

Length 212aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018124651.1
Definition PREDICTED: E3 ubiquitin-protein ligase RNF4 isoform X1 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000165        [VIEW IN EMBL-EBI]
GO:0000209        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005811        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007166        [VIEW IN EMBL-EBI]
GO:0007254        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019221        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0023014        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0031098        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043122        [VIEW IN EMBL-EBI]
GO:0043123        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048660        [VIEW IN EMBL-EBI]
GO:0048661        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051090        [VIEW IN EMBL-EBI]
GO:0051091        [VIEW IN EMBL-EBI]
GO:0051092        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051403        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070498        [VIEW IN EMBL-EBI]
GO:0070534        [VIEW IN EMBL-EBI]
GO:0070555        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071345        [VIEW IN EMBL-EBI]
GO:0071347        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902533        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCACTCTTGAAGTGAGGGGGCCTTCTCTTAGAGGGTATAGACGGAGGAAGGCAGTGCTGGATCTAAATGTTCCACCTAGTGAAATCCGGGAACAGGAGGGTACTTCGCAACAGGCTGGGTCTGAGGAATTGACTAGCCAGCCCTTGCCGCCTGTACCGCCTGCTACTATTGATGTTGAGGCTTTTGATGATGATGTAATTGAATCTTCTGCTAGAGCATTTGCAGAGATTTTATGTCAGGCTAAAAACAATTCAAGGAGGAGCCGTGGAAGGACTGTTCTAGTTGATTTAGATTCAGGCCAGCTGGCTAGGTCAACTAATAATAATCACAACAGGCGCAGAAGACTTCCTCCAAGCCAGACAGTTATCAATTGTGATCATTATATCAATTTGGAAAGCACAGCACAGACTATGGTTGAGGAAATTATAAAGCCTCAGCCACCTCCAAAGGAACCAACCTTCAATTGTCCAATTTGCATGGGTCCATTAGTTGAGGAGATGTCAACAAGGTGTGGGCACATTTTCTGCAAGGCATGCATTAAAGCTGCAATAGCTGCCCAGGGAAAGTGCCCTACTTGCAGGAAAAGAGTCACTGTGAAGGAACTAATTAGGGTCTTCCTTCCTTCAGCCAGTTGA
Protein:  
MSTLEVRGPSLRGYRRRKAVLDLNVPPSEIREQEGTSQQAGSEELTSQPLPPVPPATIDVEAFDDDVIESSARAFAEILCQAKNNSRRSRGRTVLVDLDSGQLARSTNNNHNRRRRLPPSQTVINCDHYINLESTAQTMVEEIIKPQPPPKEPTFNCPICMGPLVEEMSTRCGHIFCKACIKAAIAAQGKCPTCRKRVTVKELIRVFLPSAS